Ecology & Environmental

Biodiversity metrics, species accumulation, and environmental monitoring.

Specialized Visualizations

Species Accumulation Curve

ecopy

scikit-bio

Plots the cumulative number of species recorded as a function of sampling effort.

Prompt

"Generate a proper example species abundance dataset and create a rarefaction curve using scikit-bio. Plot the expected species richness vs. sample size with standard error shading."

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Rank Abundance Curve

scikit-bio

matplotlib

Visualizes relative species abundance (biodiversity) where species are ranked from most to least abundant.

Prompt

"Generate a proper example species abundance dataset for three different habitats and create a rank-abundance curve (Whittaker plot) using matplotlib. Use a log-scale for the y-axis (Relative Abundance)."

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